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Year | Number of Results |
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2020 | 1 |
2023 | 4 |
2024 | 0 |
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Page 1
Tracing cancer evolution and heterogeneity using Hi-C.
Nat Commun. 2023 Nov 6;14(1):7111. doi: 10.1038/s41467-023-42651-2.
Nat Commun. 2023.
PMID: 37932252
Free PMC article.
Predicting the effect of CRISPR-Cas9-based epigenome editing.
Batra SS, Cabrera A, Spence JP, Hilton IB, Song YS.
Batra SS, et al.
bioRxiv [Preprint]. 2023 Oct 3:2023.10.03.560674. doi: 10.1101/2023.10.03.560674.
bioRxiv. 2023.
PMID: 37873127
Free PMC article.
Preprint.
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DNA language models are powerful predictors of genome-wide variant effects.
Benegas G, Batra SS, Song YS.
Benegas G, et al. Among authors: batra ss.
Proc Natl Acad Sci U S A. 2023 Oct 31;120(44):e2311219120. doi: 10.1073/pnas.2311219120. Epub 2023 Oct 26.
Proc Natl Acad Sci U S A. 2023.
PMID: 37883436
Free PMC article.
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The ENCODE Imputation Challenge: a critical assessment of methods for cross-cell type imputation of epigenomic profiles.
Schreiber J, Boix C, Wook Lee J, Li H, Guan Y, Chang CC, Chang JC, Hawkins-Hooker A, Schölkopf B, Schweikert G, Carulla MR, Canakoglu A, Guzzo F, Nanni L, Masseroli M, Carman MJ, Pinoli P, Hong C, Yip KY, Spence JP, Batra SS, Song YS, Mahony S, Zhang Z, Tan W, Shen Y, Sun Y, Shi M, Adrian J, Sandstrom R, Farrell N, Halow J, Lee K, Jiang L, Yang X, Epstein C, Strattan JS, Bernstein B, Snyder M, Kellis M, Stafford W, Kundaje A; ENCODE Imputation Challenge Participants.
Schreiber J, et al. Among authors: batra ss.
Genome Biol. 2023 Apr 18;24(1):79. doi: 10.1186/s13059-023-02915-y.
Genome Biol. 2023.
PMID: 37072822
Free PMC article.
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Accurate assembly of the olive baboon (Papio anubis) genome using long-read and Hi-C data.
Batra SS, Levy-Sakin M, Robinson J, Guillory J, Durinck S, Vilgalys TP, Kwok PY, Cox LA, Seshagiri S, Song YS, Wall JD.
Batra SS, et al.
Gigascience. 2020 Dec 7;9(12):giaa134. doi: 10.1093/gigascience/giaa134.
Gigascience. 2020.
PMID: 33283855
Free PMC article.
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